BLASTP: At3g54660 vs Arabidopsis Proteins
| Locus | Score | Alignment Length | Percenty Identity | Expect |
| AT3G54660.1 | 1084 | 547 | 100 | 0 |
| AT3G24170.1 | 491 | 468 | 52 | 6e-139 |
TBLASTN: At3g54660 vs DFCI Gene Indices for Plant ESTs
| Taxon | Dataset | Number of Hits | Max. Score | Strongest E_value |
| Arabidopsis thaliana | AGI.042210 | 10 | 1083 | 0 |
| Cotton (Gossypium) | CGI.031910 | 19 | 895 | 0 |
| Vitis vinifera | VVGI.042210 | 11 | 881 | 0 |
| Nicotiana tabacum | NTGI.042210 | 15 | 879 | 0 |
| Soybean (Glycine max) | GMGI.042210 | 10 | 846 | 0 |
| Tomato (Lycopersicon esculentum) | LGI.042210 | 10 | 820 | 0 |
| Rice (Oryza sativa) | OGI.042210 | 15 | 819 | 0 |
| Spruce | SGI.031910 | 6 | 793 | 0 |
| Maize (Zea mays) | ZMGI.060509 | 15 | 793 | 0 |
| Brassica napus | BNGI.031910 | 19 | 545 | 3e-155 |
| Helianthus annuus | HAGI.052909 | 6 | 518 | 2e-147 |
| Medicago truncatula | MTGI.042210 | 6 | 507 | 9e-144 |
| Sorghum (Sorghum bicolor) | SBGI.072508 | 7 | 505 | 2e-143 |
| Potato (Solanum tuberosum) | STGI.042210 | 16 | 494 | 8e-140 |
| Pinus | PGI.042210 | 8 | 489 | 2e-139 |
| Chlamydomonas reinhardtii | CHRGI.042210 | 3 | 434 | 3.9999999999999997e-122 |
| Lotus japonicus | LJGI.051810 | 7 | 392 | 1e-109 |
| Populus | PPLGI.042210 | 18 | 389 | 2e-140 |
BLASTP: At3g54660 vs Non-Plant Model Organism Proteins
| Taxon | Number of Hits | Max. Score | Strongest E_value |
| Danio rerio | 5 | 401 | 7.000000000000001e-112 |
| Escherichia coli | 4 | 355 | 5.0000000000000005e-99 |
| Neurospora crassa | 2 | 320 | 5e-88 |
| Caenorhabditis elegans | 5 | 313 | 1e-85 |
| Schizosaccharomyces pombe | 2 | 309 | 5e-85 |
| Homo sapiens | 8 | 301 | 1.0000000000000001e-81 |
| Saccharomyces cerevisiae | 3 | 296 | 5.000000000000001e-81 |
| Drosophila melanogaster | 5 | 265 | 5.9999999999999995e-71 |
| Synechocystis | 1 | 178 | 9e-46 |