Aug 17, 2018 4:32 PM
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Database Query
SeedGenes Profile: AMP 1
Gene Information
Gene Symbol
AMP 1
Chromosome Locus
At3g54720
Alleles in Database
1
Identity Confidence
Confirmed
Alias Symbol
PT
(I. Vizir) Sequence Identity
COP 2
(X.W. Deng) Complemetation Test
HPT
(G. Jurgens) Complemetation Test
Gene Class
Embryo Defective
Predicted Function
Putative Glutamate Carboxypeptidase
Function Details
Similar to N-acetyl a-linked acidic dipeptidase (NAALADase); Potential signaling function related to MP
Gene Evidence
Sequenced Mutant Allele
A. Chaudhury (1 allele)
Database Release
March, 2002
Predicted Sequences
Gene:
3124 nucleotides
mRNA:
2278 nucleotides
Protein:
705 amino acids
cDNA Status
FLcDNA Available:
AY088945
Top BLAST Hits
Arabidopsis
:
AT5G19740.1 (43%)
Plant ESTs:
Brassica napus (89%)
Model Genomes:
Homo sapiens (32%)
Subcellular Localization
TargetP
Not Targeted to Cell Compartment
SUBA
mRNA Expression Data
NASCArray Spot History for
251856_at
Mutant Information
Allele Symbol
amp 1-1
Mutant Class
Embryo Defective
Source of Mutant
A. Chaudhury
Mutant Line Number
Ecotype
Columbia
Genetic Background
ABRC Stock
CS8324
Mutagen Treatment
EMS
Insertion Mutant
No
Flanking Sequence
Location of Mutation
Exon 7
Terminal Phenotype
Cotyledon
Details
Nomarski Phenotype
Images
Allelism Evidence
Reference Allele
Database Release
March, 2002
Seed Color
Green
Embryo Color
Green
Percent Mutant Seeds
24.1 %
Chi - Square
0.4
Seeds Counted
900
Percent Top Half
43.3 %
Chi - Square
3.9
Average Seed Length
410 ± 50 µm
Average Embryo Length
300 ± 70 µm