Aug 17, 2018 4:32 PM
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Database Query
SeedGenes Profile: AtCFM 2
Gene Information
Gene Symbol
AtCFM 2
Chromosome Locus
At3g01370
Alleles in Database
2
See List
OR
Show All
Identity Confidence
Confirmed
Alias Symbol
Gene Class
Embryo Defective
Predicted Function
Chloroplast Intron Splicing Factor
Function Details
Splicing of plastid group II introns
Gene Evidence
Border Recovery
Barkan / Salk (1 allele)
Border Recovery
Barkan / (1 allele)
Database Release
October, 2007
Predicted Sequences
Gene:
4696 nucleotides
mRNA:
3287 nucleotides
Protein:
1011 amino acids
cDNA Status
FLcDNA Available:
AY136347
Top BLAST Hits
Arabidopsis
:
AT3G23070.1 (41%)
Plant ESTs:
Brassica napus (82%)
Model Genomes:
None
Subcellular Localization
TargetP
Targeted to Chloroplasts
SUBA
mRNA Expression Data
NASCArray Spot History for
258949_at
Mutant Information
Allele Symbol
atcfm 2-1
Mutant Class
Embryo Defective
Source of Mutant
Barkan / Salk
Mutant Line Number
SALK_000703
Ecotype
Columbia
Genetic Background
ABRC Stock
Mutagen Treatment
T-DNA
Insertion Mutant
Yes
Details
Flanking Sequence
Location of Mutation
Exon 5
Terminal Phenotype
Not Available
Nomarski Phenotype
Allelism Evidence
Reference Allele
Database Release
October, 2007
Seed Color
Embryo Color
Percent Mutant Seeds
Chi - Square
Seeds Counted
Percent Top Half
Chi - Square
Average Seed Length
Average Embryo Length