OSU Syngenta vbi

SeedGenes Profile: AtECB 2

Gene Information
Gene Symbol AtECB 2
Chromosome Locus At1g15510   tair
Alleles in Database 2   See List OR Show All
Identity Confidence Confirmed
Alias Symbol  
Gene Class Seed Pigment
Predicted Function PPR protein
Function Details Processing of organellar mRNAs
Gene Evidence
Border Recovery
Yang / Salk (1 allele)
Border Recovery
Z.N. Yang (1 allele)
Border Recovery
Meinke / Salk (1 allele)
Database Release December, 2010
Predicted Sequences
Gene:2601 nucleotides
mRNA: 2601 nucleotides
Protein:  866 amino acids
cDNA Status EST Identified
Top BLAST Hits
Arabidopsis: AT4G18750.1 (35%)
Plant ESTs: Rice (Oryza sativa) (54%)
Model Genomes:   None
Subcellular Localization TargetP Targeted to Chloroplasts
SUBA
mRNA Expression Data NASCArray Spot History for 261762_at
    
Mutant Information
Allele Symbol atecb 2-1atecb 2-2
Mutant Class Seed PigmentSeed Pigment
Source of Mutant Yang / SalkMyouga / Salk
Mutant Line Number SALK_112251SALK_142130
Ecotype ColumbiaColumbia
Genetic Background   
ABRC Stock   
Mutagen Treatment T-DNAT-DNA
Insertion Mutant Yes   DetailsYes   Details
Flanking Sequence   
Location of Mutation Exon 16Exon 1
Terminal Phenotype Pigment DefectivePigment Defective
Nomarski Phenotype
Allelism Evidence Reference AlleleSequence Identity
Database Release December, 2010December, 2010
Seed Color   
Embryo Color   
Percent Mutant Seeds  22.6 %
Chi - Square  2.1
Seeds Counted  654
Percent Top Half   
Chi - Square   
Average Seed Length   
Average Embryo Length