SeedGenes Profile: AtVPS 9A

Gene Information Gene Symbol AtVPS 9A Chromosome Locus At3g19770   Alleles in Database 1 Identity Confidence Confirmed Alias Symbol   Gene Class Embryo Defective Predicted Function Rab5 Guanine Exchange Factor Function Details Proposed role in endocytosis; regulator of Rab5 GTPase Gene Evidence Molecular Complementation A. Nakano (1 allele) Database Release October, 2007 Predicted Sequences Gene: 2670 nucleotides mRNA: 2034 nucleotides Protein:   520 amino acids cDNA Status FLcDNA Available: AY045810 Top BLAST Hits Arabidopsis: AT5G09320.1 (73%) Plant ESTs: Nicotiana tabacum (63%) Model Genomes:   Schizosaccharomyces pombe (34%) Subcellular Localization TargetP Not Targeted to Cell Compartment SUBA mRNA Expression Data NASCArray Spot History for 257989_at

Mutant Information Allele Symbol atvps 9a-1 Mutant Class Embryo Defective Source of Mutant A. Nakano Mutant Line Number   Ecotype   Genetic Background   ABRC Stock   Mutagen Treatment null Insertion Mutant Yes   Details Flanking Sequence   Location of Mutation   Terminal Phenotype Cotyledon Nomarski Phenotype   Allelism Evidence Reference Allele Database Release October, 2007 Seed Color   Embryo Color   Percent Mutant Seeds   Chi - Square   Seeds Counted   Percent Top Half   Chi - Square   Average Seed Length   Average Embryo Length