Aug 17, 2018 4:32 PM
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Database Query
SeedGenes Profile: CLB 4
Gene Information
Gene Symbol
CLB 4
Chromosome Locus
At5g60600
Alleles in Database
2
See List
OR
Show All
Identity Confidence
Confirmed
Alias Symbol
ISPG
(P. Leon) Alternate Name
Gene Class
Seed Pigment
Predicted Function
Isoprenoid Biosynthesis
Function Details
Plastid MEP pathway
Gene Evidence
Sequenced Mutant Allele
P. Leon (1 allele)
Border Recovery
Leon / Salk (1 allele)
Database Release
December, 2010
Predicted Sequences
Gene:
4520 nucleotides
mRNA:
2650 nucleotides
Protein:
741 amino acids
cDNA Status
FLcDNA Available:
AY081261
Top BLAST Hits
Arabidopsis
:
Only self hit
Plant ESTs:
Tomato (Lycopersicon esculentum) (83%)
Model Genomes:
Synechocystis (47%)
Subcellular Localization
TargetP
Targeted to Chloroplasts
SUBA
mRNA Expression Data
NASCArray Spot History for
247637_at
Mutant Information
Allele Symbol
clb 4-2
Mutant Class
Seed Pigment
Source of Mutant
Leon / Salk
Mutant Line Number
SALK_017595
Ecotype
Columbia
Genetic Background
ABRC Stock
Mutagen Treatment
T-DNA
Insertion Mutant
Yes
Details
Flanking Sequence
Location of Mutation
Exon 16
Terminal Phenotype
Pigment Defective
Nomarski Phenotype
Allelism Evidence
Complementation Test; Sequence Identity
Database Release
December, 2010
Seed Color
Embryo Color
Percent Mutant Seeds
Chi - Square
Seeds Counted
Percent Top Half
Chi - Square
Average Seed Length
Average Embryo Length