Aug 17, 2018 4:32 PM
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Database Query
SeedGenes Profile: CLPS 3
Gene Information
Gene Symbol
CLPS 3
Chromosome Locus
At3g04680
Alleles in Database
1
Identity Confidence
Confirmed
Alias Symbol
Gene Class
Embryo Defective
Predicted Function
Polyadenylation Factor
Function Details
mRNA 3' end processing
Gene Evidence
Molecular Complementation
Q. Li (1 allele)
Border Recovery
Li / Salk (1 allele)
Database Release
December, 2010
Predicted Sequences
Gene:
3110 nucleotides
mRNA:
1801 nucleotides
Protein:
444 amino acids
cDNA Status
FLcDNA Available:
AY062866
Top BLAST Hits
Arabidopsis
:
AT5G39930.1 (55%)
Plant ESTs:
Cotton (Gossypium) (72%)
Model Genomes:
Homo sapiens (41%)
Subcellular Localization
TargetP
Targeted to Chloroplasts
SUBA
mRNA Expression Data
NASCArray Spot History for
258842_at
Mutant Information
Allele Symbol
clps 3-1
Mutant Class
Embryo Defective
Source of Mutant
Li / Salk
Mutant Line Number
SALK_025156
Ecotype
Columbia
Genetic Background
ABRC Stock
Mutagen Treatment
T-DNA
Insertion Mutant
Yes
Details
Flanking Sequence
Location of Mutation
Intron 8
Terminal Phenotype
Preglobular
Nomarski Phenotype
Allelism Evidence
Reference Allele
Database Release
December, 2010
Seed Color
Embryo Color
Percent Mutant Seeds
Chi - Square
Seeds Counted
Percent Top Half
Chi - Square
Average Seed Length
Average Embryo Length