SeedGenes Profile: COP 1

Gene Information Gene Symbol COP 1 Chromosome Locus At2g32950   Alleles in Database 1 Identity Confidence Confirmed Alias Symbol FUS 1 (S. Misera) Complemetation Test EMB 168 (D. Meinke) Alternate Name Gene Class Seed Pigment Predicted Function Nuclear Protein that Represses Photomorphogenesis in the Dark Function Details Targets HY5 protein for degradation via the 26S proteasome in the dark Gene Evidence Molecular Complementation X.W. Deng (1 allele) Border Recovery X.W. Deng (1 allele) Database Release March, 2002 Predicted Sequences Gene: 5603 nucleotides mRNA: 2348 nucleotides Protein:   675 amino acids cDNA Status FLcDNA Available: L24437 Top BLAST Hits Arabidopsis: AT4G11110.1 (48%) Plant ESTs: Vitis vinifera (74%) Model Genomes:   Danio rerio (39%) Subcellular Localization TargetP Not Targeted to Cell Compartment SUBA mRNA Expression Data NASCArray Spot History for 267640_at

Mutant Information Allele Symbol cop 1-5 Mutant Class Seed Pigment Source of Mutant Deng / Feldmann Mutant Line Number 5959 Ecotype Wassilewskija Genetic Background   ABRC Stock CS6259 Mutagen Treatment T-DNA Insertion Mutant Yes   Details Flanking Sequence   Location of Mutation Exon 8 Terminal Phenotype Fusca Nomarski Phenotype   Allelism Evidence Reference Allele Database Release March, 2002 Seed Color Fusca Embryo Color Fusca Percent Mutant Seeds 25.3 % Chi - Square <0.1 Seeds Counted 1197 Percent Top Half 51.2 % Chi - Square 0.2 Average Seed Length   Average Embryo Length