SeedGenes Profile: COP 9

Gene Information Gene Symbol COP 9 Chromosome Locus At4g14110   Alleles in Database 1 Identity Confidence Confirmed Alias Symbol FUS 7 (X.W. Deng) Sequence Identity EMB 143 (D. Meinke) Alternate Name Gene Class Seed Pigment Predicted Function Component of COP9 Signalosome Function Details Light-regulated signal transduction and protein degradation Gene Evidence Molecular Complementation X.W. Deng (1 allele) Border Recovery X.W. Deng (1 allele) Database Release March, 2002 Predicted Sequences Gene: 2035 nucleotides mRNA: 810 nucleotides Protein:   197 amino acids cDNA Status FLcDNA Available: L32874 Top BLAST Hits Arabidopsis: Only self hit Plant ESTs: Brassica napus (89%) Model Genomes:   None Subcellular Localization TargetP Not Targeted to Cell Compartment SUBA mRNA Expression Data NASCArray Spot History for 245255_at

Mutant Information Allele Symbol cop 9-1 Mutant Class Seed Pigment Source of Mutant Deng / Feldmann Mutant Line Number 3612 Ecotype Wassilewskija Genetic Background   ABRC Stock CS6262 Mutagen Treatment T-DNA Insertion Mutant Yes   Details Flanking Sequence   Location of Mutation Exon 3 Terminal Phenotype Fusca Nomarski Phenotype   Allelism Evidence Reference Allele Database Release March, 2002 Seed Color Fusca Embryo Color Fusca Percent Mutant Seeds 22.2 % Chi - Square 4.5 Seeds Counted 1047 Percent Top Half 55.2 % Chi - Square 2.5 Average Seed Length   Average Embryo Length