Aug 17, 2018 4:32 PM
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SeedGenes Profile: COP 9
Gene Information
Gene Symbol
COP 9
Chromosome Locus
At4g14110
Alleles in Database
1
Identity Confidence
Confirmed
Alias Symbol
FUS 7
(X.W. Deng) Sequence Identity
EMB 143
(D. Meinke) Alternate Name
Gene Class
Seed Pigment
Predicted Function
Component of COP9 Signalosome
Function Details
Light-regulated signal transduction and protein degradation
Gene Evidence
Molecular Complementation
X.W. Deng (1 allele)
Border Recovery
X.W. Deng (1 allele)
Database Release
March, 2002
Predicted Sequences
Gene:
2035 nucleotides
mRNA:
810 nucleotides
Protein:
197 amino acids
cDNA Status
FLcDNA Available:
L32874
Top BLAST Hits
Arabidopsis
:
Only self hit
Plant ESTs:
Brassica napus (89%)
Model Genomes:
None
Subcellular Localization
TargetP
Not Targeted to Cell Compartment
SUBA
mRNA Expression Data
NASCArray Spot History for
245255_at
Mutant Information
Allele Symbol
cop 9-1
Mutant Class
Seed Pigment
Source of Mutant
Deng / Feldmann
Mutant Line Number
3612
Ecotype
Wassilewskija
Genetic Background
ABRC Stock
CS6262
Mutagen Treatment
T-DNA
Insertion Mutant
Yes
Details
Flanking Sequence
Location of Mutation
Exon 3
Terminal Phenotype
Fusca
Nomarski Phenotype
Allelism Evidence
Reference Allele
Database Release
March, 2002
Seed Color
Fusca
Embryo Color
Fusca
Percent Mutant Seeds
22.2 %
Chi - Square
4.5
Seeds Counted
1047
Percent Top Half
55.2 %
Chi - Square
2.5
Average Seed Length
Average Embryo Length