Aug 17, 2018 4:32 PM
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Database Query
SeedGenes Profile: EGY 1
Gene Information
Gene Symbol
EGY 1
Chromosome Locus
At5g35220
Alleles in Database
4
See List
OR
Show All
Identity Confidence
Confirmed
Alias Symbol
Gene Class
Seed Pigment
Predicted Function
ATP-Independent Metalloprotease
Function Details
None
Gene Evidence
Sequenced Mutant Allele
N. Li (1 allele)
Molecular Complementation
N. Li (2 alleles)
Border Recovery
Li / Salk (2 alleles)
Border Recovery
Meinke / Wisconsin (1 allele)
Database Release
December, 2010
Predicted Sequences
Gene:
3154 nucleotides
mRNA:
1860 nucleotides
Protein:
548 amino acids
cDNA Status
FLcDNA Available:
AY050809
Top BLAST Hits
Arabidopsis
:
AT5G35210.1 (98%)
Plant ESTs:
Medicago truncatula (67%)
Model Genomes:
Synechocystis (36%)
Subcellular Localization
TargetP
Targeted to Chloroplasts
SUBA
mRNA Expression Data
NASCArray Spot History for
246654_s_at
Mutant Information
Allele Symbol
egy 1-2
Mutant Class
Seed Pigment
Source of Mutant
Li / Salk
Mutant Line Number
SALK_134931
Ecotype
Columbia
Genetic Background
ABRC Stock
Mutagen Treatment
T-DNA
Insertion Mutant
Yes
Details
Flanking Sequence
Location of Mutation
Intron 1
Terminal Phenotype
Pigment Defective
Nomarski Phenotype
Allelism Evidence
Sequence Identity
Database Release
December, 2010
Seed Color
Embryo Color
Percent Mutant Seeds
Chi - Square
Seeds Counted
Percent Top Half
Chi - Square
Average Seed Length
Average Embryo Length