OSU Syngenta vbi

SeedGenes Profile: EMB 104

Gene Information
Gene Symbol EMB 104
Chromosome Locus At4g32400   tair
Alleles in Database 4   See List OR Show All
Identity Confidence Confirmed
Alias Symbol  
Gene Class Embryo Defective
Predicted Function Transport Protein (SHS1/AtBT1)
Function Details Plastid nucleotide export
Gene Evidence
Border Recovery
D. Meinke (1 allele)
Border Recovery
Meinke / Salk (1 allele)
Border Recovery
Meinke / GABI (1 allele)
Database Release December, 2010
Predicted Sequences
Gene:1841 nucleotides
mRNA: 1467 nucleotides
Protein:  392 amino acids
cDNA Status FLcDNA Available: AF372944
Top BLAST Hits
Arabidopsis: Only self hit
Plant ESTs: Vitis vinifera (68%)
Model Genomes:  Neurospora crassa (32%)
Subcellular Localization TargetP Not Targeted to Cell Compartment
SUBA
mRNA Expression Data NASCArray Spot History for 253435_at
    
Mutant Information
Allele Symbol emb 104-1emb 104-2
Mutant Class Embryo DefectiveEmbryo Defective
Source of Mutant Meinke / DuPontD. Meinke
Mutant Line Number 11892D-L2
Ecotype WassilewskijaColumbia
Genetic Background   
ABRC Stock   
Mutagen Treatment T-DNAEMS
Insertion Mutant Yes   DetailsNo
Flanking Sequence   
Location of Mutation Exon 3 
Terminal Phenotype CotyledonCotyledon
Nomarski Phenotype
Allelism Evidence Reference AlleleComplementation Test
Database Release December, 2010December, 2010
Seed Color   
Embryo Color   
Percent Mutant Seeds 23.0 %25.5 %
Chi - Square   
Seeds Counted   
Percent Top Half 54.3 % 
Chi - Square   
Average Seed Length   
Average Embryo Length