Aug 17, 2018 4:32 PM
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Database Query
SeedGenes Profile: EMB 1220
Gene Information
Gene Symbol
EMB 1220
Chromosome Locus
At1g60170
Alleles in Database
1
Identity Confidence
Not Confirmed
Alias Symbol
Gene Class
Embryo Defective
Predicted Function
PRP31 Splicing Factor
Function Details
Pre-mRNA processing (PRP) factor required for spliceosome assembly
Gene Evidence
Single Border Recovery
Meinke / Syngenta (1 allele)
Database Release
March, 2002
Predicted Sequences
Gene:
2628 nucleotides
mRNA:
1819 nucleotides
Protein:
485 amino acids
cDNA Status
FLcDNA Available:
AY080777
Top BLAST Hits
Arabidopsis
:
Only self hit
Plant ESTs:
Brassica napus (91%)
Model Genomes:
Homo sapiens (46%)
Subcellular Localization
TargetP
Not Targeted to Cell Compartment
SUBA
mRNA Expression Data
NASCArray Spot History for
264221_s_at
Mutant Information
Allele Symbol
emb 1220
Mutant Class
Embryo Defective
Source of Mutant
Meinke / Syngenta
Mutant Line Number
5283
Ecotype
Columbia
Genetic Background
ABRC Stock
CS16014
Mutagen Treatment
T-DNA
Insertion Mutant
Yes
Details
Flanking Sequence
Location of Mutation
Terminal Phenotype
Cotyledon
Details
Nomarski Phenotype
Images
Allelism Evidence
Reference Allele
Database Release
March, 2002
Seed Color
Pale Yellow-Green
Embryo Color
Pale Yellow-Green
Percent Mutant Seeds
26.6 %
Chi - Square
1.6
Seeds Counted
1130
Percent Top Half
50.8 %
Chi - Square
0.1
Average Seed Length
530 ± 40 µm
Average Embryo Length
230 ± 100 µm