OSU Syngenta vbi

SeedGenes Profile: EMB 1956

Gene Information
Gene Symbol EMB 1956
Chromosome Locus At2g04030   tair
Alleles in Database 2   See List OR Show All
Identity Confidence Confirmed
Alias Symbol  
Gene Class Embryo Defective
Predicted Function Heat Shock Protein (Hsp90)
Function Details Molecular chaperone; Putative buffer against phenptypic effects of environmental stress and internal genetic variations
Gene Evidence
Single Border Recovery
Meinke / Syngenta (1 allele)
Double Border Recovery
Meinke / Syngenta (1 allele)
Database Release September, 2002
Predicted Sequences
Gene:4264 nucleotides
mRNA: 2680 nucleotides
Protein:  780 amino acids
cDNA Status FLcDNA Available: AF436826
Top BLAST Hits
Arabidopsis: AT3G07770.1 (70%)
Plant ESTs: Populus (81%)
Model Genomes:  Danio rerio (45%)
Subcellular Localization TargetP Targeted to Chloroplasts
mRNA Expression Data NASCArray Spot History for 263483_at
Mutant Information
Allele Symbol emb 1956-1
Mutant Class Embryo Defective
Source of Mutant Meinke / Syngenta
Mutant Line Number 53210
Ecotype Columbia
Genetic Background  
ABRC Stock CS16104
Mutagen Treatment T-DNA
Insertion Mutant Yes   Details
Flanking Sequence Details  (Help)
Location of Mutation Intron 9
Terminal Phenotype Transition  Details
Nomarski Phenotype   Images
Allelism Evidence Complementation Test; Sequence Identity
Database Release September, 2002
Seed Color White
Embryo Color White
Percent Mutant Seeds 26.7 %
Chi - Square 1.5
Seeds Counted 967
Percent Top Half 54.3 %
Chi - Square 1.9
Average Seed Length 480 ± 40 µm
Average Embryo Length 100 ± 50 µm