Aug 17, 2018 4:33 PM
Home
|
Access Page
|
Database Query
SeedGenes Profile: EMB 2770
Gene Information
Gene Symbol
EMB 2770
Chromosome Locus
At4g03430
Alleles in Database
2
See List
OR
Show All
Identity Confidence
Confirmed
Alias Symbol
STA 1
(J.K. Zhu) Sequence Identity
Gene Class
Embryo Defective
Predicted Function
U5 snRNP (Prp6)
Function Details
Proposed role in pre-mRNA splicing
Gene Evidence
Border Recovery
Meinke; Zhu / Salk (1 allele)
Single Border Recovery
Meinke / Salk (1 allele)
Database Release
October, 2007
Predicted Sequences
Gene:
3430 nucleotides
mRNA:
3430 nucleotides
Protein:
1029 amino acids
cDNA Status
FLcDNA Available:
AY059720
Top BLAST Hits
Arabidopsis
:
Only self hit
Plant ESTs:
Vitis vinifera (76%)
Model Genomes:
Homo sapiens (53%)
Subcellular Localization
TargetP
Not Targeted to Cell Compartment
SUBA
mRNA Expression Data
NASCArray Spot History for
255382_at
Mutant Information
Allele Symbol
emb 2770-1
Mutant Class
Embryo Defective
Source of Mutant
Meinke; Zhu / Salk
Mutant Line Number
SALK_009304
Ecotype
Columbia
Genetic Background
ABRC Stock
Mutagen Treatment
T-DNA
Insertion Mutant
Yes
Details
Flanking Sequence
Location of Mutation
Exon 1
Terminal Phenotype
Transition
Details
Nomarski Phenotype
Images
Allelism Evidence
Reference Allele
Database Release
October, 2007
Seed Color
White to Pale Yellow
Embryo Color
White to Pale Yellow
Percent Mutant Seeds
25.7 %
Chi - Square
0.2
Seeds Counted
746
Percent Top Half
49.0 %
Chi - Square
0.1
Average Seed Length
520 ± 80 µm
Average Embryo Length
60 ± 50 µm