Aug 17, 2018 4:33 PM
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Database Query
SeedGenes Profile: EMB 2771
Gene Information
Gene Symbol
EMB 2771
Chromosome Locus
At5g05560
Alleles in Database
1
Identity Confidence
Not Confirmed
Alias Symbol
APC 1
(TAIR) Alternate Name
Gene Class
Embryo Defective
Predicted Function
E3 Ubiquitin Ligase (APC1)
Function Details
Anaphase promoting complex 1; cell cycle regulation
Gene Evidence
Single Border Recovery
Meinke / Salk (1 allele)
Database Release
October, 2007
Predicted Sequences
Gene:
13305 nucleotides
mRNA:
5108 nucleotides
Protein:
1678 amino acids
cDNA Status
EST Identified
Top BLAST Hits
Arabidopsis
:
Only self hit
Plant ESTs:
Rice (Oryza sativa) (51%)
Model Genomes:
Homo sapiens (30%)
Subcellular Localization
TargetP
Not Targeted to Cell Compartment
SUBA
mRNA Expression Data
NASCArray Spot History for
250787_at
Mutant Information
Allele Symbol
emb 2771
Mutant Class
Embryo Defective
Source of Mutant
Meinke / Salk
Mutant Line Number
SALK_059826
Ecotype
Columbia
Genetic Background
ABRC Stock
Mutagen Treatment
T-DNA
Insertion Mutant
Yes
Details
Flanking Sequence
Location of Mutation
Exon
Terminal Phenotype
Cotyledon
Details
Nomarski Phenotype
Images
Allelism Evidence
Reference Allele
Database Release
October, 2007
Seed Color
White to Pale Yellow
Embryo Color
White to Pale Yellow
Percent Mutant Seeds
15.7 %
Chi - Square
37.1
Seeds Counted
808
Percent Top Half
48.8 %
Chi - Square
0.1
Average Seed Length
430 ± 130 µm
Average Embryo Length
50 ± 70 µm