OSU Syngenta vbi

SeedGenes Profile: EMB 2771

Gene Information
Gene Symbol EMB 2771
Chromosome Locus At5g05560   tair
Alleles in Database 1
Identity Confidence Not Confirmed
Alias Symbol APC 1 (TAIR) Alternate Name
Gene Class Embryo Defective
Predicted Function E3 Ubiquitin Ligase (APC1)
Function Details Anaphase promoting complex 1; cell cycle regulation
Gene Evidence
Single Border Recovery
Meinke / Salk (1 allele)
Database Release October, 2007
Predicted Sequences
Gene:13305 nucleotides
mRNA: 5108 nucleotides
Protein:  1678 amino acids
cDNA Status EST Identified
Top BLAST Hits
Arabidopsis: Only self hit
Plant ESTs: Rice (Oryza sativa) (51%)
Model Genomes:  Homo sapiens (30%)
Subcellular Localization TargetP Not Targeted to Cell Compartment
SUBA
mRNA Expression Data NASCArray Spot History for 250787_at
    
Mutant Information
Allele Symbol emb 2771
Mutant Class Embryo Defective
Source of Mutant Meinke / Salk
Mutant Line Number SALK_059826
Ecotype Columbia
Genetic Background  
ABRC Stock  
Mutagen Treatment T-DNA
Insertion Mutant Yes   Details
Flanking Sequence  
Location of Mutation Exon
Terminal Phenotype Cotyledon  Details
Nomarski Phenotype   Images
Allelism Evidence Reference Allele
Database Release October, 2007
Seed Color White to Pale Yellow
Embryo Color White to Pale Yellow
Percent Mutant Seeds 15.7 %
Chi - Square 37.1
Seeds Counted 808
Percent Top Half 48.8 %
Chi - Square 0.1
Average Seed Length 430 ± 130 µm
Average Embryo Length 50 ± 70 µm