Aug 17, 2018 4:33 PM
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Database Query
SeedGenes Profile: EMB 2777
Gene Information
Gene Symbol
EMB 2777
Chromosome Locus
At2g43650
Alleles in Database
1
Identity Confidence
Not Confirmed
Alias Symbol
EMB 2796
(D. Meinke) Alternate Name
Gene Class
Embryo Defective
Predicted Function
U3 snoRNP (Utp3); Processome Small Subunit
Function Details
Putative regulator of chromatin silencing
Gene Evidence
Single Border Recovery
Meinke / Salk (1 allele)
Database Release
October, 2007
Predicted Sequences
Gene:
4108 nucleotides
mRNA:
2355 nucleotides
Protein:
654 amino acids
cDNA Status
FLcDNA Available:
AY099689
Top BLAST Hits
Arabidopsis
:
Only self hit
Plant ESTs:
Brassica napus (73%)
Model Genomes:
None
Subcellular Localization
TargetP
Not Targeted to Cell Compartment
SUBA
mRNA Expression Data
NASCArray Spot History for
260585_at
Mutant Information
Allele Symbol
emb 2777
Mutant Class
Embryo Defective
Source of Mutant
Meinke / Salk
Mutant Line Number
SALK_036872
Ecotype
Columbia
Genetic Background
ABRC Stock
Mutagen Treatment
T-DNA
Insertion Mutant
Yes
Details
Flanking Sequence
Location of Mutation
Exon 13
Terminal Phenotype
Cotyledon
Details
Nomarski Phenotype
Images
Allelism Evidence
Reference Allele
Database Release
October, 2007
Seed Color
Pale Yellow
Embryo Color
Pale Yellow
Percent Mutant Seeds
25.8 %
Chi - Square
0.3
Seeds Counted
947
Percent Top Half
55.7 %
Chi - Square
3.2
Average Seed Length
530 ± 60 µm
Average Embryo Length
130 ± 60 µm