OSU Syngenta vbi

SeedGenes Profile: EMB 2799

Gene Information
Gene Symbol EMB 2799
Chromosome Locus At2g39080   tair
Alleles in Database 1
Identity Confidence Not Confirmed
Alias Symbol  
Gene Class Embryo Defective
Predicted Function Unknown
Function Details Potential role in chloroplast nutrient transport
Gene Evidence
Border Recovery
Meinke / Salk (1 allele)
Database Release December, 2010
Predicted Sequences
Gene:2744 nucleotides
mRNA: 1305 nucleotides
Protein:  351 amino acids
cDNA Status FLcDNA Available: AY065091
Top BLAST Hits
Arabidopsis: Only self hit
Plant ESTs: Brassica napus (82%)
Model Genomes:   None
Subcellular Localization TargetP Targeted to Chloroplasts
SUBA
mRNA Expression Data NASCArray Spot History for 266192_at
    
Mutant Information
Allele Symbol emb 2799
Mutant Class Embryo Defective
Source of Mutant Meinke / Salk
Mutant Line Number SALK_087872
Ecotype Columbia
Genetic Background  
ABRC Stock  
Mutagen Treatment T-DNA
Insertion Mutant Yes   Details
Flanking Sequence  
Location of Mutation Exon 1
Terminal Phenotype Cotyledon  Details
Nomarski Phenotype  
Allelism Evidence Reference Allele
Database Release December, 2010
Seed Color White to Pale Yellow
Embryo Color White to Pale Yellow
Percent Mutant Seeds 23.5 %
Chi - Square 0.3
Seeds Counted 255
Percent Top Half 53.3 %
Chi - Square 0.3
Average Seed Length 430 ± 60 µm
Average Embryo Length 90 ± 120 µm