Aug 17, 2018 4:33 PM
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Database Query
SeedGenes Profile: EMB 3003
Gene Information
Gene Symbol
EMB 3003
Chromosome Locus
At1g34430
Alleles in Database
1
Identity Confidence
Not Confirmed
Alias Symbol
Gene Class
Embryo Defective
Predicted Function
Dihydrolipoamide S-Acetyltransferase; Chloroplast Pyruvate Decarboxylase Complex; Putative E3 Binding Protein
Function Details
Acetyl-CoA formation
Gene Evidence
Single Border Recovery
Meinke / Genoplante (1 allele)
Database Release
September, 2004
Predicted Sequences
Gene:
2441 nucleotides
mRNA:
1781 nucleotides
Protein:
465 amino acids
cDNA Status
FLcDNA Available:
AY128294
Top BLAST Hits
Arabidopsis
:
AT3G25860.1 (65%)
Plant ESTs:
Brassica napus (81%)
Model Genomes:
Synechocystis (59%)
Subcellular Localization
TargetP
Targeted to Chloroplasts
SUBA
mRNA Expression Data
NASCArray Spot History for
261165_at
Mutant Information
Allele Symbol
emb 3003
Mutant Class
Embryo Defective
Source of Mutant
Meinke / Genoplante
Mutant Line Number
EYP4
Ecotype
Wassilewskija
Genetic Background
ABRC Stock
Mutagen Treatment
T-DNA
Insertion Mutant
Yes
Details
Flanking Sequence
Location of Mutation
Exon 1
Terminal Phenotype
Preglobular
Details
Nomarski Phenotype
Globular
Allelism Evidence
Reference Allele
Database Release
September, 2004
Seed Color
Pale Yellow
Embryo Color
Pale Yellow
Percent Mutant Seeds
23.8 %
Chi - Square
0.9
Seeds Counted
1065
Percent Top Half
51.8 %
Chi - Square
0.3
Average Seed Length
430 ± 60 µm
Average Embryo Length
20 ± 10 µm