Aug 17, 2018 4:33 PM
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SeedGenes Profile: EMB 3117
Gene Information
Gene Symbol
EMB 3117
Chromosome Locus
At2g47940
Alleles in Database
1
Identity Confidence
Not Confirmed
Alias Symbol
Gene Class
Embryo Defective
Predicted Function
Chloroplast DegP2 Protease
Function Details
Cleaves D1 protein
Gene Evidence
Border Recovery
Myouga / JIC (1 allele)
Database Release
December, 2010
Predicted Sequences
Gene:
4247 nucleotides
mRNA:
2278 nucleotides
Protein:
607 amino acids
cDNA Status
FLcDNA Available:
AY075700
Top BLAST Hits
Arabidopsis
:
AT5G40200.1 (52%)
Plant ESTs:
Rice (Oryza sativa) (75%)
Model Genomes:
None
Subcellular Localization
TargetP
Targeted to Chloroplasts
SUBA
mRNA Expression Data
NASCArray Spot History for
266509_at
Mutant Information
Allele Symbol
emb 3117
Mutant Class
Embryo Defective
Source of Mutant
Myouga / JIC
Mutant Line Number
GT_5_53741
Ecotype
Landsberg erecta
Genetic Background
ABRC Stock
Mutagen Treatment
Transposon
Insertion Mutant
Yes
Details
Flanking Sequence
Location of Mutation
Exon 1
Terminal Phenotype
Preglobular
Nomarski Phenotype
Allelism Evidence
Reference Allele
Database Release
December, 2010
Seed Color
Embryo Color
Percent Mutant Seeds
23.8 %
Chi - Square
0.3
Seeds Counted
432
Percent Top Half
Chi - Square
Average Seed Length
Average Embryo Length