OSU Syngenta vbi

SeedGenes Profile: EMB 3121

Gene Information
Gene Symbol EMB 3121
Chromosome Locus At3g17910   tair
Alleles in Database 2   See List OR Show All
Identity Confidence Confirmed
Alias Symbol  
Gene Class Embryo Defective
Predicted Function Cytochrome C Oxidase Assembly in Mitochondria
Function Details Electron transport
Gene Evidence
Border Recovery
Myouga / Riken (1 allele)
Border Recovery
Meinke / Salk (1 allele)
Database Release December, 2010
Predicted Sequences
Gene:2844 nucleotides
mRNA: 1436 nucleotides
Protein:  354 amino acids
cDNA Status FLcDNA Available: AY056161
Top BLAST Hits
Arabidopsis: AT1G48510.1 (46%)
Plant ESTs: Brassica napus (81%)
Model Genomes:   None
Subcellular Localization TargetP Targeted to Chloroplasts
SUBA
mRNA Expression Data NASCArray Spot History for 258164_at
    
Mutant Information
Allele Symbol emb 3121-1emb 3121-2
Mutant Class Embryo DefectiveEmbryo Defective
Source of Mutant Meinke / RikenMeinke / Salk
Mutant Line Number RATM54-3828-1SALK_133094
Ecotype NossenColumbia
Genetic Background   
ABRC Stock   
Mutagen Treatment TransposonT-DNA
Insertion Mutant Yes   DetailsYes   Details
Flanking Sequence   
Location of Mutation  Intron 1
Terminal Phenotype CotyledonCotyledon
Nomarski Phenotype
Allelism Evidence Reference AlleleComplementation Test; Sequence Identity
Database Release December, 2010December, 2010
Seed Color   
Embryo Color   
Percent Mutant Seeds 21.9 %20.5 %
Chi - Square 2.03.0
Seeds Counted 388254
Percent Top Half   
Chi - Square   
Average Seed Length   
Average Embryo Length