OSU Syngenta vbi

SeedGenes Profile: EMB 506

Gene Information
Gene Symbol EMB 506
Chromosome Locus At5g40160   tair
Alleles in Database 1
Identity Confidence Confirmed
Alias Symbol EMB 139 (D. Meinke) Complemetation Test
Gene Class Embryo Defective
Predicted Function Uncertain
Function Details Ankyrin repeat protein
Gene Evidence
Double Border Recovery
M. Devic (1 allele)
Database Release March, 2002
Predicted Sequences
Gene:1871 nucleotides
mRNA: 1243 nucleotides
Protein:  315 amino acids
cDNA Status FLcDNA Available: AF026167
Top BLAST Hits
Arabidopsis: Only self hit
Plant ESTs: Cotton (Gossypium) (76%)
Model Genomes:   None
Subcellular Localization TargetP Targeted to Chloroplasts
SUBA
mRNA Expression Data NASCArray Spot History for 249404_at
    
Mutant Information
Allele Symbol emb 506emb 139
Mutant Class Embryo DefectiveEmbryo Defective
Source of Mutant M. Devic / VersaillesMeinke / DuPont
Mutant Line Number  2943
Ecotype WassilewskijaWassilewskija
Genetic Background   
ABRC Stock   
Mutagen Treatment T-DNAT-DNA
Insertion Mutant Yes   DetailsNo
Flanking Sequence   
Location of Mutation Intron 4 
Terminal Phenotype Globular  DetailsGlobular
Nomarski Phenotype   Images
Allelism Evidence Reference AlleleComplementation Test
Database Release March, 2002December, 2010
Seed Color White 
Embryo Color White 
Percent Mutant Seeds 23.9 %24.5 %
Chi - Square 0.9 
Seeds Counted 1311 
Percent Top Half 53.0 %60.7 %
Chi - Square 1.3 
Average Seed Length 430 ± 30 µm 
Average Embryo Length 40 ± 10 µm