Aug 17, 2018 4:33 PM
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Database Query
SeedGenes Profile: HYD 1
Gene Information
Gene Symbol
HYD 1
Chromosome Locus
At1g20050
Alleles in Database
2
See List
OR
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Identity Confidence
Confirmed
Alias Symbol
Gene Class
Embryo Defective
Predicted Function
Sterol Isomerase
Function Details
Catalyzes sterol biosynthetic step downstream of FACKEL
Gene Evidence
Sequenced Mutant Allele
K. Lindsey (1 allele)
Molecular Complementation
K. Lindsey (1 allele)
Border Recovery
K. Lindsey (1 allele)
Database Release
September, 2002
Predicted Sequences
Gene:
1277 nucleotides
mRNA:
973 nucleotides
Protein:
223 amino acids
cDNA Status
FLcDNA Available:
AY086087
Top BLAST Hits
Arabidopsis
:
Only self hit
Plant ESTs:
Brassica napus (83%)
Model Genomes:
None
Subcellular Localization
TargetP
Not Targeted to Cell Compartment
SUBA
mRNA Expression Data
NASCArray Spot History for
261228_at
Mutant Information
Allele Symbol
hyd 1-2
Mutant Class
Embryo Defective
Source of Mutant
K. Lindsey
Mutant Line Number
Ecotype
Wassilewskija
Genetic Background
ABRC Stock
Mutagen Treatment
T-DNA
Insertion Mutant
Yes
Details
Flanking Sequence
Location of Mutation
Intron 1
Terminal Phenotype
Cotyledon
Details
Nomarski Phenotype
Images
Allelism Evidence
Reference Allele
Database Release
September, 2002
Seed Color
Green
Embryo Color
Green
Percent Mutant Seeds
28.5 %
Chi - Square
8.1
Seeds Counted
1209
Percent Top Half
54.8 %
Chi - Square
3.2
Average Seed Length
520 ± 70 µm
Average Embryo Length
290 ± 70 µm