Aug 17, 2018 4:33 PM
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Database Query
SeedGenes Profile: IM
Gene Information
Gene Symbol
IM
Chromosome Locus
At4g22260
Alleles in Database
1
Identity Confidence
Confirmed
Alias Symbol
Gene Class
Seed Pigment
Predicted Function
Chloroplast Homolog of Mitochondrial Alternative Oxidase
Function Details
Cofactor for carotenoid desaturation; prevents photooxidative damage during early stages of plastid formation
Gene Evidence
Sequenced Mutant Allele
S. Rodermel (1 allele)
Database Release
March, 2002
Predicted Sequences
Gene:
2759 nucleotides
mRNA:
1431 nucleotides
Protein:
351 amino acids
cDNA Status
FLcDNA Available:
AF098072
Top BLAST Hits
Arabidopsis
:
Only self hit
Plant ESTs:
Brassica napus (86%)
Model Genomes:
None
Subcellular Localization
TargetP
Targeted to Chloroplasts
SUBA
mRNA Expression Data
NASCArray Spot History for
254335_at
Mutant Information
Allele Symbol
im
Mutant Class
Seed Pigment
Source of Mutant
S. Rodermel
Mutant Line Number
spotty
Ecotype
Columbia
Genetic Background
ABRC Stock
Mutagen Treatment
EMS
Insertion Mutant
No
Flanking Sequence
Location of Mutation
Exon 4
Terminal Phenotype
Pigment Defective
Nomarski Phenotype
Allelism Evidence
Reference Allele
Database Release
March, 2002
Seed Color
White to Pale Yellow
Embryo Color
White to Pale Yellow
Percent Mutant Seeds
24.7 %
Chi - Square
<0.1
Seeds Counted
992
Percent Top Half
54.7 %
Chi - Square
2.2
Average Seed Length
Average Embryo Length