SeedGenes Profile: LIG 1

Gene Information Gene Symbol LIG 1 Chromosome Locus At1g08130   Alleles in Database 1 Identity Confidence Not Confirmed Alias Symbol AtLIG 1 (C. West) Alternate Name Gene Class Embryo Defective Predicted Function DNA Replication and Repair Function Details Joining of adjacent polynucleotides Gene Evidence Border Recovery S. Kushnir (1 allele) Database Release December, 2010 Predicted Sequences Gene: 5245 nucleotides mRNA: 2715 nucleotides Protein:   790 amino acids cDNA Status FLcDNA Available: AK117238 Top BLAST Hits Arabidopsis: AT1G49250.1 (73%) Plant ESTs: Rice (Oryza sativa) (71%) Model Genomes:   Danio rerio (48%) Subcellular Localization TargetP Targeted to Chloroplasts SUBA mRNA Expression Data NASCArray Spot History for 261810_at

Mutant Information Allele Symbol lig 1 Mutant Class Embryo Defective Source of Mutant Kushnir Mutant Line Number SK1-B2 Ecotype   Genetic Background   ABRC Stock   Mutagen Treatment T-DNA Insertion Mutant Yes   Details Flanking Sequence   Location of Mutation Intron Terminal Phenotype Not Available Nomarski Phenotype   Allelism Evidence Reference Allele Database Release December, 2010 Seed Color   Embryo Color   Percent Mutant Seeds   Chi - Square   Seeds Counted   Percent Top Half   Chi - Square   Average Seed Length   Average Embryo Length