Aug 17, 2018 4:33 PM
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Database Query
SeedGenes Profile: LIG 1
Gene Information
Gene Symbol
LIG 1
Chromosome Locus
At1g08130
Alleles in Database
1
Identity Confidence
Not Confirmed
Alias Symbol
AtLIG 1
(C. West) Alternate Name
Gene Class
Embryo Defective
Predicted Function
DNA Replication and Repair
Function Details
Joining of adjacent polynucleotides
Gene Evidence
Border Recovery
S. Kushnir (1 allele)
Database Release
December, 2010
Predicted Sequences
Gene:
5245 nucleotides
mRNA:
2715 nucleotides
Protein:
790 amino acids
cDNA Status
FLcDNA Available:
AK117238
Top BLAST Hits
Arabidopsis
:
AT1G49250.1 (73%)
Plant ESTs:
Rice (Oryza sativa) (71%)
Model Genomes:
Danio rerio (48%)
Subcellular Localization
TargetP
Targeted to Chloroplasts
SUBA
mRNA Expression Data
NASCArray Spot History for
261810_at
Mutant Information
Allele Symbol
lig 1
Mutant Class
Embryo Defective
Source of Mutant
Kushnir
Mutant Line Number
SK1-B2
Ecotype
Genetic Background
ABRC Stock
Mutagen Treatment
T-DNA
Insertion Mutant
Yes
Details
Flanking Sequence
Location of Mutation
Intron
Terminal Phenotype
Not Available
Nomarski Phenotype
Allelism Evidence
Reference Allele
Database Release
December, 2010
Seed Color
Embryo Color
Percent Mutant Seeds
Chi - Square
Seeds Counted
Percent Top Half
Chi - Square
Average Seed Length
Average Embryo Length