Aug 17, 2018 4:33 PM
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Database Query
SeedGenes Profile: MSI 1
Gene Information
Gene Symbol
MSI 1
Chromosome Locus
At5g58230
Alleles in Database
1
Identity Confidence
Confirmed
Alias Symbol
MEE 70
(Sundaresan) Sequence Identity
Gene Class
50% Defective Seeds
Predicted Function
WD-40 Repeat Protein
Function Details
Component of MEA/FIE chromatin-modifying complex
Gene Evidence
Molecular Complementation
W. Grusseim (1 allele)
Border Recovery
W. Grusseim (1 allele)
Database Release
March, 2004
Predicted Sequences
Gene:
2234 nucleotides
mRNA:
1626 nucleotides
Protein:
424 amino acids
cDNA Status
FLcDNA Available:
AY059874
Top BLAST Hits
Arabidopsis
:
AT2G16780.1 (55%)
Plant ESTs:
Brassica napus (95%)
Model Genomes:
Homo sapiens (68%)
Subcellular Localization
TargetP
Not Targeted to Cell Compartment
SUBA
mRNA Expression Data
NASCArray Spot History for
247821_at
Mutant Information
Allele Symbol
msi 1
Mutant Class
50% Defective Seeds
Source of Mutant
Gruissem / SAIL
Mutant Line Number
Ecotype
Columbia
Genetic Background
ABRC Stock
Mutagen Treatment
T-DNA
Insertion Mutant
Yes
Details
Flanking Sequence
Location of Mutation
Exon 2
Terminal Phenotype
Globular
Nomarski Phenotype
Allelism Evidence
Reference Allele
Database Release
March, 2004
Seed Color
Embryo Color
Percent Mutant Seeds
Chi - Square
Seeds Counted
Percent Top Half
Chi - Square
Average Seed Length
Average Embryo Length