Aug 17, 2018 4:33 PM
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Database Query
SeedGenes Profile: P5CS 2
Gene Information
Gene Symbol
P5CS 2
Chromosome Locus
At3g55610
Alleles in Database
1
Identity Confidence
Confirmed
Alias Symbol
Gene Class
Embryo Defective
Predicted Function
Proline Biosynthesis
Function Details
Delta 1-pyrroline-5-carboxylate synthetase
Gene Evidence
Experimental Data
C. Koncz (1 allele)
Border Recovery
C. Koncz (1 allele)
Database Release
October, 2007
Predicted Sequences
Gene:
5074 nucleotides
mRNA:
2543 nucleotides
Protein:
726 amino acids
cDNA Status
FLcDNA Available:
AY091766
Top BLAST Hits
Arabidopsis
:
AT2G39800.1 (89%)
Plant ESTs:
Brassica napus (90%)
Model Genomes:
Homo sapiens (47%)
Subcellular Localization
TargetP
Not Targeted to Cell Compartment
SUBA
mRNA Expression Data
NASCArray Spot History for
251775_s_at
Mutant Information
Allele Symbol
p5cs 2
Mutant Class
Embryo Defective
Source of Mutant
C. Koncz
Mutant Line Number
Ecotype
Genetic Background
ABRC Stock
Mutagen Treatment
T-DNA
Insertion Mutant
Yes
Details
Flanking Sequence
Location of Mutation
Exon 16
Terminal Phenotype
Cotyledon
Nomarski Phenotype
Allelism Evidence
Reference Allele
Database Release
October, 2007
Seed Color
Embryo Color
Percent Mutant Seeds
Chi - Square
Seeds Counted
Percent Top Half
Chi - Square
Average Seed Length
Average Embryo Length