OSU Syngenta vbi

SeedGenes Profile: PAS 1

Gene Information
Gene Symbol PAS 1
Chromosome Locus At3g54010   tair
Alleles in Database 1
Identity Confidence Confirmed
Alias Symbol  
Gene Class Embryo Defective
Predicted Function Immunophilin-like FK506 Binding Protein
Function Details Postulated to function in hormone signalling pathways
Gene Evidence
Sequenced Mutant Allele
J.D. Faure (1 allele)
Molecular Complementation
J.D. Faure (1 allele)
Database Release March, 2002
Predicted Sequences
Gene:4323 nucleotides
mRNA: 2209 nucleotides
Protein:  635 amino acids
cDNA Status FLcDNA Available: AY056265
Top BLAST Hits
Arabidopsis: Only self hit
Plant ESTs: Brassica napus (89%)
Model Genomes:   None
Subcellular Localization TargetP Not Targeted to Cell Compartment
mRNA Expression Data NASCArray Spot History for 251932_at
Mutant Information
Allele Symbol pas 1-2
Mutant Class Embryo Defective
Source of Mutant J.D. Faure
Mutant Line Number E595
Ecotype Columbia
Genetic Background  
ABRC Stock  
Mutagen Treatment EMS
Insertion Mutant No
Flanking Sequence  
Location of Mutation Exon 14
Terminal Phenotype Cotyledon  Details
Nomarski Phenotype   Images
Allelism Evidence Reference Allele
Database Release March, 2002
Seed Color Pale Green to Green
Embryo Color Pale Green to Green
Percent Mutant Seeds 23.7 %
Chi - Square 1.0
Seeds Counted 1188
Percent Top Half 58.5 %
Chi - Square 8.2
Average Seed Length 540 ± 40 µm
Average Embryo Length 290 ± 80 µm