SeedGenes Profile: PAS 2

Gene Information Gene Symbol PAS 2 Chromosome Locus At5g10480   Alleles in Database 2   See List OR Show All Identity Confidence Confirmed Alias Symbol PEPINO (R. Torres-Ruiz) Sequence Identity Gene Class Embryo Defective Predicted Function 3-Hydroxy-Acyl-CoA Dehydratase Function Details Very-long-chain fatty acid biosynthesis Gene Evidence Sequenced Mutant Allele J.D. Faure (1 allele) Molecular Complementation J.D. Faure (1 allele) Sequenced Mutant Allele R. Torres-Ruiz (1 allele) Molecular Complementation R. Torres-Ruiz (1 allele) Database Release March, 2003 Predicted Sequences Gene: 2348 nucleotides mRNA: 1012 nucleotides Protein:   221 amino acids cDNA Status FLcDNA Available: AY065090 Top BLAST Hits Arabidopsis: Only self hit Plant ESTs: Brassica napus (92%) Model Genomes:   Homo sapiens (42%) Subcellular Localization TargetP Targeted to Secretory Pathway SUBA mRNA Expression Data NASCArray Spot History for 250428_at

Mutant Information Allele Symbol pas 2 pepino Mutant Class Embryo Defective Embryo Defective Source of Mutant J.D. Faure R. Torres-Ruiz Mutant Line Number     Ecotype Columbia Landsberg erecta Genetic Background     ABRC Stock     Mutagen Treatment EMS EMS Insertion Mutant No No Flanking Sequence     Location of Mutation Intron 9   Terminal Phenotype Cotyledon Cotyledon Nomarski Phenotype Allelism Evidence Reference Allele Sequence Identity Database Release March, 2003 March, 2003 Seed Color     Embryo Color     Percent Mutant Seeds     Chi - Square     Seeds Counted     Percent Top Half     Chi - Square     Average Seed Length     Average Embryo Length