Aug 17, 2018 4:33 PM
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Database Query
SeedGenes Profile: PDE 194
Gene Information
Gene Symbol
PDE 194
Chromosome Locus
At1g66520
Alleles in Database
1
Identity Confidence
Not Confirmed
Alias Symbol
Gene Class
Seed Pigment
Predicted Function
Methionyl-tRNA Formyltransferase
Function Details
Putative role in translation initiation
Gene Evidence
Double Border Recovery
Meinke / Syngenta (1 allele)
Database Release
September, 2002
Predicted Sequences
Gene:
2617 nucleotides
mRNA:
1321 nucleotides
Protein:
355 amino acids
cDNA Status
FLcDNA Available:
AK229501
Top BLAST Hits
Arabidopsis
:
Only self hit
Plant ESTs:
Brassica napus (87%)
Model Genomes:
Escherichia coli (31%)
Subcellular Localization
TargetP
Targeted to Chloroplasts
SUBA
mRNA Expression Data
NASCArray Spot History for
256361_at
Mutant Information
Allele Symbol
pde 194
Mutant Class
Seed Pigment
Source of Mutant
Meinke / Syngenta
Mutant Line Number
15377
Ecotype
Columbia
Genetic Background
ABRC Stock
CS16098
Mutagen Treatment
T-DNA
Insertion Mutant
Yes
Details
Flanking Sequence
Details
(Help)
Location of Mutation
Intron 10
Terminal Phenotype
Pigment Defective
Nomarski Phenotype
Allelism Evidence
Reference Allele
Database Release
September, 2002
Seed Color
White
Embryo Color
White
Percent Mutant Seeds
25.1 %
Chi - Square
<0.1
Seeds Counted
822
Percent Top Half
50.5 %
Chi - Square
<0.1
Average Seed Length
Average Embryo Length