Aug 17, 2018 4:34 PM
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SeedGenes Profile: PDE 322
Gene Information
Gene Symbol
PDE 322
Chromosome Locus
At3g52380
Alleles in Database
1
Identity Confidence
Not Confirmed
Alias Symbol
Gene Class
Seed Pigment
Predicted Function
Chloroplast RNA Binding Protein (CP33)
Function Details
Postulated to stabilize chloroplast mRNAs
Gene Evidence
Double Border Recovery
Meinke / Syngenta (1 allele)
Database Release
September, 2003
Predicted Sequences
Gene:
1701 nucleotides
mRNA:
1454 nucleotides
Protein:
329 amino acids
cDNA Status
FLcDNA Available:
AY085279
Top BLAST Hits
Arabidopsis
:
Only self hit
Plant ESTs:
Brassica napus (77%)
Model Genomes:
None
Subcellular Localization
TargetP
Targeted to Chloroplasts
SUBA
mRNA Expression Data
NASCArray Spot History for
256678_at
Mutant Information
Allele Symbol
pde 322
Mutant Class
Seed Pigment
Source of Mutant
Meinke / Syngenta
Mutant Line Number
39846
Ecotype
Columbia
Genetic Background
ABRC Stock
CS16232
Mutagen Treatment
T-DNA
Insertion Mutant
Yes
Details
Flanking Sequence
Details
(Help)
Location of Mutation
5' UTR to 3' UTR
Terminal Phenotype
Pigment Defective
Nomarski Phenotype
Allelism Evidence
Reference Allele
Database Release
September, 2003
Seed Color
White
Embryo Color
White
Percent Mutant Seeds
27.4 %
Chi - Square
2.8
Seeds Counted
917
Percent Top Half
49.4 %
Chi - Square
<0.1
Average Seed Length
Average Embryo Length