SeedGenes Profile: PDE 326

Gene Information Gene Symbol PDE 326 Chromosome Locus At3g03710   Alleles in Database 4   See List OR Show All Identity Confidence Confirmed Alias Symbol RIF 10 (M. Rodgriguez-C) Sequence Identity Gene Class Seed Pigment Predicted Function Plastid Polynucleotide Phosphorylase Function Details Proposed role in 23S rRNA 3' end processing Gene Evidence Border Recovery Meinke / Salk (2 alleles) Border Recovery Rodriguez-Concepcion / Weigel (1 allele) Border Recovery Rodriguez-Concepcion / Salk (1 allele) Database Release December, 2010 Predicted Sequences Gene: 5797 nucleotides mRNA: 3103 nucleotides Protein:   922 amino acids cDNA Status FLcDNA Available: AJ252123 Top BLAST Hits Arabidopsis: AT5G14580.1 (42%) Plant ESTs: Rice (Oryza sativa) (73%) Model Genomes:   Escherichia coli (40%) Subcellular Localization TargetP Targeted to Chloroplasts SUBA mRNA Expression Data NASCArray Spot History for 259344_at

Mutant Information Allele Symbol rif 10-1 Mutant Class Seed Pigment Source of Mutant Rodriguez-Concepcion / Weigel Mutant Line Number N/A Ecotype Columbia Genetic Background   ABRC Stock   Mutagen Treatment T-DNA Insertion Mutant Yes   Details Flanking Sequence   Location of Mutation Intron 12 Terminal Phenotype Pigment Defective Nomarski Phenotype   Allelism Evidence Sequence Identity Database Release December, 2010 Seed Color   Embryo Color   Percent Mutant Seeds   Chi - Square   Seeds Counted   Percent Top Half   Chi - Square   Average Seed Length   Average Embryo Length