Aug 17, 2018 4:34 PM
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Database Query
SeedGenes Profile: PDE 329
Gene Information
Gene Symbol
PDE 329
Chromosome Locus
At3g55250
Alleles in Database
1
Identity Confidence
Not Confirmed
Alias Symbol
Gene Class
Seed Pigment
Predicted Function
Uncertain
Function Details
Similar to calcium homeostasis regulator
Gene Evidence
Border Recovery
Myouga / Riken (1 allele)
Database Release
December, 2010
Predicted Sequences
Gene:
1346 nucleotides
mRNA:
1157 nucleotides
Protein:
277 amino acids
cDNA Status
FLcDNA Available:
AY099793
Top BLAST Hits
Arabidopsis
:
Only self hit
Plant ESTs:
Brassica napus (88%)
Model Genomes:
None
Subcellular Localization
TargetP
Targeted to Chloroplasts
SUBA
mRNA Expression Data
NASCArray Spot History for
251810_at
Mutant Information
Allele Symbol
pde 329
Mutant Class
Seed Pigment
Source of Mutant
Myouga / Riken
Mutant Line Number
RATM11-4676-1
Ecotype
Nossen
Genetic Background
ABRC Stock
Mutagen Treatment
Transposon
Insertion Mutant
Yes
Details
Flanking Sequence
Location of Mutation
Exon 1
Terminal Phenotype
Pigment Defective
Nomarski Phenotype
Allelism Evidence
Reference Allele
Database Release
December, 2010
Seed Color
Embryo Color
Percent Mutant Seeds
21.9 %
Chi - Square
1.5
Seeds Counted
282
Percent Top Half
Chi - Square
Average Seed Length
Average Embryo Length