Aug 17, 2018 4:34 PM
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Database Query
SeedGenes Profile: PDE 333
Gene Information
Gene Symbol
PDE 333
Chromosome Locus
At4g28590
Alleles in Database
1
Identity Confidence
Not Confirmed
Alias Symbol
Gene Class
Seed Pigment
Predicted Function
Unknown
Function Details
None
Gene Evidence
Border Recovery
Myouga / Riken (1 allele)
Database Release
December, 2010
Predicted Sequences
Gene:
1607 nucleotides
mRNA:
1141 nucleotides
Protein:
331 amino acids
cDNA Status
FLcDNA Available:
AK176513
Top BLAST Hits
Arabidopsis
:
Only self hit
Plant ESTs:
Vitis vinifera (67%)
Model Genomes:
None
Subcellular Localization
TargetP
Targeted to Chloroplasts
SUBA
mRNA Expression Data
NASCArray Spot History for
253782_at
Mutant Information
Allele Symbol
pde 333
Mutant Class
Seed Pigment
Source of Mutant
Myouga / Riken
Mutant Line Number
RATM53-3696-1
Ecotype
Nossen
Genetic Background
ABRC Stock
Mutagen Treatment
Transposon
Insertion Mutant
Yes
Details
Flanking Sequence
Location of Mutation
Terminal Phenotype
Pigment Defective
Nomarski Phenotype
Allelism Evidence
Reference Allele
Database Release
December, 2010
Seed Color
Embryo Color
Percent Mutant Seeds
23.9 %
Chi - Square
0.4
Seeds Counted
665
Percent Top Half
Chi - Square
Average Seed Length
Average Embryo Length