OSU Syngenta vbi

SeedGenes Profile: PDE 334

Gene Information
Gene Symbol PDE 334
Chromosome Locus At4g32260   tair
Alleles in Database 2   See List OR Show All
Identity Confidence Not Confirmed
Alias Symbol  
Gene Class Seed Pigment
Predicted Function ATP Synthase Family
Function Details None
Gene Evidence
Border Recovery
Myouga / Riken (1 allele)
Border Recovery
Myouga / CSHL (1 allele)
Database Release December, 2010
Predicted Sequences
Gene:1102 nucleotides
mRNA: 1034 nucleotides
Protein:  219 amino acids
cDNA Status FLcDNA Available: BX827104
Top BLAST Hits
Arabidopsis: Only self hit
Plant ESTs: Brassica napus (88%)
Model Genomes:   None
Subcellular Localization TargetP Targeted to Chloroplasts
SUBA
mRNA Expression Data NASCArray Spot History for 253420_at
    
Mutant Information
Allele Symbol pde 334-1pde 334-2
Mutant Class Seed PigmentSeed Pigment
Source of Mutant Myouga / RikenMyouga / CSHL
Mutant Line Number RATM11-1957-1CSHL_GT5007
Ecotype NossenLandsberg erecta
Genetic Background   
ABRC Stock   
Mutagen Treatment TransposonTransposon
Insertion Mutant Yes   DetailsYes   Details
Flanking Sequence   
Location of Mutation  Exon 1
Terminal Phenotype Pigment DefectivePigment Defective
Nomarski Phenotype
Allelism Evidence Reference AlleleSequence Identity
Database Release December, 2010December, 2010
Seed Color   
Embryo Color   
Percent Mutant Seeds 26.5 %29.1 %
Chi - Square 0.74.7
Seeds Counted 722547
Percent Top Half   
Chi - Square   
Average Seed Length   
Average Embryo Length