SeedGenes Profile: PDE 335

Gene Information Gene Symbol PDE 335 Chromosome Locus At5g02120   Alleles in Database 1 Identity Confidence Not Confirmed Alias Symbol   Gene Class Seed Pigment Predicted Function Uncertain Function Details Thylakoid one helix protein Gene Evidence Border Recovery Myouga / JIC (1 allele) Database Release December, 2010 Predicted Sequences Gene: 683 nucleotides mRNA: 526 nucleotides Protein:   110 amino acids cDNA Status FLcDNA Available: AY062846 Top BLAST Hits Arabidopsis: Only self hit Plant ESTs: Brassica napus (88%) Model Genomes:   None Subcellular Localization TargetP Targeted to Chloroplasts SUBA mRNA Expression Data NASCArray Spot History for 251031_at

Mutant Information Allele Symbol pde 335 Mutant Class Seed Pigment Source of Mutant Myouga / JIC Mutant Line Number GT_5_81048 Ecotype Landsberg erecta Genetic Background   ABRC Stock   Mutagen Treatment Transposon Insertion Mutant Yes   Details Flanking Sequence   Location of Mutation Exon 1 Terminal Phenotype Pigment Defective Nomarski Phenotype   Allelism Evidence Reference Allele Database Release December, 2010 Seed Color   Embryo Color   Percent Mutant Seeds 29.6 % Chi - Square 5.7 Seeds Counted 493 Percent Top Half   Chi - Square   Average Seed Length   Average Embryo Length