SeedGenes Profile: PDE 336

Gene Information Gene Symbol PDE 336 Chromosome Locus At5g09790   Alleles in Database 1 Identity Confidence Not Confirmed Alias Symbol   Gene Class Seed Pigment Predicted Function SET-Domain Protein (ATXR5) Function Details Putative histone methyltransferase Gene Evidence Border Recovery Myouga / JIC (1 allele) Database Release December, 2010 Predicted Sequences Gene: 1990 nucleotides mRNA: 1363 nucleotides Protein:   379 amino acids cDNA Status FLcDNA Available: AY064131 Top BLAST Hits Arabidopsis: AT5G24330.1 (60%) Plant ESTs: Populus (67%) Model Genomes:   None Subcellular Localization TargetP Targeted to Chloroplasts SUBA mRNA Expression Data NASCArray Spot History for 250492_at

Mutant Information Allele Symbol pde 336 Mutant Class Seed Pigment Source of Mutant Myouga / JIC Mutant Line Number GT_5_43118 Ecotype Landsberg erecta Genetic Background   ABRC Stock   Mutagen Treatment Transposon Insertion Mutant Yes   Details Flanking Sequence   Location of Mutation Exon 1 Terminal Phenotype Pigment Defective Nomarski Phenotype   Allelism Evidence Reference Allele Database Release December, 2010 Seed Color   Embryo Color   Percent Mutant Seeds 26.7 % Chi - Square 0.8 Seeds Counted 528 Percent Top Half   Chi - Square   Average Seed Length   Average Embryo Length