SeedGenes Profile: PDE 338

Gene Information Gene Symbol PDE 338 Chromosome Locus At1g71720   Alleles in Database 1 Identity Confidence Not Confirmed Alias Symbol   Gene Class Seed Pigment Predicted Function RNA Binding Protein Function Details None Gene Evidence Border Recovery Myouga / CSHL (1 allele) Database Release December, 2010 Predicted Sequences Gene: 2247 nucleotides mRNA: 1561 nucleotides Protein:   487 amino acids cDNA Status FLcDNA Available: AK221633 Top BLAST Hits Arabidopsis: Only self hit Plant ESTs: Rice (Oryza sativa) (57%) Model Genomes:   None Subcellular Localization TargetP Targeted to Chloroplasts SUBA mRNA Expression Data NASCArray Spot History for 261507_at

Mutant Information Allele Symbol pde 338 Mutant Class Seed Pigment Source of Mutant Myouga / CSHL Mutant Line Number CSHL_GT8425 Ecotype Landsberg erecta Genetic Background   ABRC Stock   Mutagen Treatment Transposon Insertion Mutant Yes   Details Flanking Sequence   Location of Mutation Exon 1 Terminal Phenotype Pigment Defective Nomarski Phenotype   Allelism Evidence Reference Allele Database Release December, 2010 Seed Color   Embryo Color   Percent Mutant Seeds 25.2 % Chi - Square <0.1 Seeds Counted 393 Percent Top Half   Chi - Square   Average Seed Length   Average Embryo Length