SeedGenes Profile: PDE 339

Gene Information Gene Symbol PDE 339 Chromosome Locus At1g76620   Alleles in Database 1 Identity Confidence Not Confirmed Alias Symbol   Gene Class Seed Pigment Predicted Function Unknown Function Details None Gene Evidence Border Recovery Myouga / CSHL (1 allele) Database Release December, 2010 Predicted Sequences Gene: 2777 nucleotides mRNA: 2016 nucleotides Protein:   527 amino acids cDNA Status FLcDNA Available: AK227157 Top BLAST Hits Arabidopsis: AT1G21060.1 (60%) Plant ESTs: Brassica napus (80%) Model Genomes:   None Subcellular Localization TargetP Targeted to Chloroplasts SUBA mRNA Expression Data NASCArray Spot History for 259985_at

Mutant Information Allele Symbol pde 339 Mutant Class Seed Pigment Source of Mutant Myouga / CSHL Mutant Line Number CSHL_ET8371 Ecotype Landsberg erecta Genetic Background   ABRC Stock   Mutagen Treatment Transposon Insertion Mutant Yes   Details Flanking Sequence   Location of Mutation Exon 4 Terminal Phenotype Pigment Defective Nomarski Phenotype   Allelism Evidence Reference Allele Database Release December, 2010 Seed Color   Embryo Color   Percent Mutant Seeds 37.3 % Chi - Square 20.0 Seeds Counted 241 Percent Top Half   Chi - Square   Average Seed Length   Average Embryo Length