Aug 17, 2018 4:34 PM
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Database Query
SeedGenes Profile: PDE 345
Gene Information
Gene Symbol
PDE 345
Chromosome Locus
At2g01140
Alleles in Database
2
See List
OR
Show All
Identity Confidence
Not Confirmed
Alias Symbol
Gene Class
Seed Pigment
Predicted Function
Fructose-Biphosphate Aldolase
Function Details
Carbohydrate metabolism
Gene Evidence
Border Recovery
Myouga / Riken (2 alleles)
Database Release
December, 2010
Predicted Sequences
Gene:
1845 nucleotides
mRNA:
1535 nucleotides
Protein:
391 amino acids
cDNA Status
FLcDNA Available:
AF325014
Top BLAST Hits
Arabidopsis
:
AT4G38970.1 (74%)
Plant ESTs:
Vitis vinifera (86%)
Model Genomes:
Caenorhabditis elegans (54%)
Subcellular Localization
TargetP
Targeted to Chloroplasts
SUBA
mRNA Expression Data
NASCArray Spot History for
265735_at
Mutant Information
Allele Symbol
pde 345-2
Mutant Class
Seed Pigment
Source of Mutant
Myouga / Riken
Mutant Line Number
RATM13-0470-1
Ecotype
Nossen
Genetic Background
ABRC Stock
Mutagen Treatment
Transposon
Insertion Mutant
Yes
Details
Flanking Sequence
Location of Mutation
Promoter or Exon 4
Terminal Phenotype
Pigment Defective
Nomarski Phenotype
Allelism Evidence
Sequence Identity
Database Release
December, 2010
Seed Color
Embryo Color
Percent Mutant Seeds
30.2 %
Chi - Square
25.9
Seeds Counted
1784
Percent Top Half
Chi - Square
Average Seed Length
Average Embryo Length