Aug 17, 2018 4:34 PM
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SeedGenes Profile: PDE 346
Gene Information
Gene Symbol
PDE 346
Chromosome Locus
At4g34830
Alleles in Database
1
Identity Confidence
Not Confirmed
Alias Symbol
Gene Class
Seed Pigment
Predicted Function
PPR Protein
Function Details
Stabilizes rbcL mRNA
Gene Evidence
Border Recovery
Myouga / Riken (1 allele)
Database Release
December, 2010
Predicted Sequences
Gene:
6423 nucleotides
mRNA:
3674 nucleotides
Protein:
1089 amino acids
cDNA Status
FLcDNA Available:
AK230279
Top BLAST Hits
Arabidopsis
:
Only self hit
Plant ESTs:
Medicago truncatula (56%)
Model Genomes:
None
Subcellular Localization
TargetP
Targeted to Chloroplasts
SUBA
mRNA Expression Data
NASCArray Spot History for
253208_at
Mutant Information
Allele Symbol
pde 346
Mutant Class
Seed Pigment
Source of Mutant
Myouga / Riken
Mutant Line Number
RATM53-3129-1
Ecotype
Nossen
Genetic Background
ABRC Stock
Mutagen Treatment
Transposon
Insertion Mutant
Yes
Details
Flanking Sequence
Location of Mutation
Terminal Phenotype
Pigment Defective
Nomarski Phenotype
Allelism Evidence
Reference Allele
Database Release
December, 2010
Seed Color
Embryo Color
Percent Mutant Seeds
27.6 %
Chi - Square
2.0
Seeds Counted
521
Percent Top Half
Chi - Square
Average Seed Length
Average Embryo Length