Aug 17, 2018 4:34 PM
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SeedGenes Profile: PDE 347
Gene Information
Gene Symbol
PDE 347
Chromosome Locus
At1g79850
Alleles in Database
1
Identity Confidence
Confirmed
Alias Symbol
Gene Class
Seed Pigment
Predicted Function
Chloroplast Ribosomal Protein S17
Function Details
Translation in chloroplast
Gene Evidence
Border Recovery
Myouga / JIC (1 allele)
Database Release
December, 2010
Predicted Sequences
Gene:
1586 nucleotides
mRNA:
710 nucleotides
Protein:
149 amino acids
cDNA Status
FLcDNA Available:
BX818035
Top BLAST Hits
Arabidopsis
:
Only self hit
Plant ESTs:
Brassica napus (79%)
Model Genomes:
None
Subcellular Localization
TargetP
Targeted to Chloroplasts
SUBA
mRNA Expression Data
NASCArray Spot History for
260165_at
Mutant Information
Allele Symbol
pde 347
Mutant Class
Seed Pigment
Source of Mutant
Myouga / JIC
Mutant Line Number
GT_5_19055
Ecotype
Landsberg erecta
Genetic Background
ABRC Stock
Mutagen Treatment
Transposon
Insertion Mutant
Yes
Details
Flanking Sequence
Location of Mutation
Exon 1
Terminal Phenotype
Pigment Defective
Nomarski Phenotype
Allelism Evidence
Reference Allele
Database Release
December, 2010
Seed Color
Embryo Color
Percent Mutant Seeds
22.9 %
Chi - Square
1.5
Seeds Counted
681
Percent Top Half
Chi - Square
Average Seed Length
Average Embryo Length