SeedGenes Profile: PDS 1

Gene Information Gene Symbol PDS 1 Chromosome Locus At1g06570   Alleles in Database 1 Identity Confidence Confirmed Alias Symbol   Gene Class Seed Pigment Predicted Function p-Hydroxyphenylpyruvate Dioxygenase Function Details First committed step in synthesis of plastoquinone and tocopherols Gene Evidence Sequenced Mutant Allele D. DellaPenna (1 allele) Molecular Complementation D. DellaPenna (1 allele) Database Release March, 2002 Predicted Sequences Gene: 1661 nucleotides mRNA: 1554 nucleotides Protein:   473 amino acids cDNA Status FLcDNA Available: AF000228 Top BLAST Hits Arabidopsis: Only self hit Plant ESTs: Brassica napus (87%) Model Genomes:   Neurospora crassa (36%) Subcellular Localization TargetP Targeted to Mitochondria SUBA mRNA Expression Data NASCArray Spot History for 262635_at

Mutant Information Allele Symbol pds 1 Mutant Class Seed Pigment Source of Mutant D. DellaPenna Mutant Line Number   Ecotype Wassilewskija Genetic Background   ABRC Stock   Mutagen Treatment T-DNA Insertion Mutant No Flanking Sequence   Location of Mutation Exon 2 Terminal Phenotype Pigment Defective Nomarski Phenotype   Allelism Evidence Reference Allele Database Release March, 2002 Seed Color White Embryo Color White Percent Mutant Seeds 28.5 % Chi - Square 6.6 Seeds Counted 992 Percent Top Half 50.9 % Chi - Square 0.1 Average Seed Length   Average Embryo Length