Aug 17, 2018 4:34 PM
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Database Query
SeedGenes Profile: PEX 12
Gene Information
Gene Symbol
PEX 12
Chromosome Locus
At3g04460
Alleles in Database
1
Identity Confidence
Confirmed
Alias Symbol
APM 4
(M. Nishimura) Alternate Name
Gene Class
Embryo Defective
Predicted Function
Peroxisomal Protein
Function Details
RING finger protein required for peroxisome biogenesis
Gene Evidence
Border Recovery
Hu / Salk (1 allele)
Database Release
October, 2007
Predicted Sequences
Gene:
2995 nucleotides
mRNA:
1723 nucleotides
Protein:
393 amino acids
cDNA Status
FLcDNA Available:
BX822720
Top BLAST Hits
Arabidopsis
:
Only self hit
Plant ESTs:
Brassica napus (92%)
Model Genomes:
Homo sapiens (29%)
Subcellular Localization
TargetP
Not Targeted to Cell Compartment
SUBA
mRNA Expression Data
NASCArray Spot History for
258627_at
Mutant Information
Allele Symbol
pex 12
Mutant Class
Embryo Defective
Source of Mutant
Hu / Salk
Mutant Line Number
SALK_013612
Ecotype
Columbia
Genetic Background
ABRC Stock
Mutagen Treatment
T-DNA
Insertion Mutant
Yes
Details
Flanking Sequence
Location of Mutation
Exon 6
Terminal Phenotype
Transition
Nomarski Phenotype
Allelism Evidence
Reference Allele
Database Release
October, 2007
Seed Color
Embryo Color
Percent Mutant Seeds
Chi - Square
Seeds Counted
Percent Top Half
Chi - Square
Average Seed Length
Average Embryo Length