OSU Syngenta vbi

SeedGenes Profile: PYG 7

Gene Information
Gene Symbol PYG 7
Chromosome Locus At1g22700   tair
Alleles in Database 3   See List OR Show All
Identity Confidence Confirmed
Alias Symbol  
Gene Class Seed Pigment
Predicted Function TPR protein; Photosystem I
Function Details Chloroplast photosynthetic function
Gene Evidence
Sequenced Mutant Allele
R. Oelmuller (1 allele)
Border Recovery
Oelmuller / SAIL (1 allele)
Border Recovery
Meinke / Riken (1 allele)
Database Release December, 2010
Predicted Sequences
Gene:1805 nucleotides
mRNA: 1155 nucleotides
Protein:  301 amino acids
cDNA Status FLcDNA Available: AF410279
Top BLAST Hits
Arabidopsis: Only self hit
Plant ESTs: Brassica napus (88%)
Model Genomes:   None
Subcellular Localization TargetP Targeted to Chloroplasts
SUBA
mRNA Expression Data NASCArray Spot History for 264199_at
    
Mutant Information
Allele Symbol pyg 7-1pyg 7-2
Mutant Class Seed PigmentSeed Pigment
Source of Mutant R. OelmullerOelmuller / SAIL
Mutant Line Number  SAIL_153_E07
Ecotype UncertainColumbia
Genetic Background   
ABRC Stock   
Mutagen Treatment EMST-DNA
Insertion Mutant NoYes   Details
Flanking Sequence   
Location of Mutation ExonExon 3
Terminal Phenotype Pigment DefectivePigment Defective
Nomarski Phenotype
Allelism Evidence Reference AlleleSequence Identity
Database Release December, 2010December, 2010
Seed Color   
Embryo Color   
Percent Mutant Seeds   
Chi - Square   
Seeds Counted   
Percent Top Half   
Chi - Square   
Average Seed Length   
Average Embryo Length