SeedGenes Profile: RPD 1

Gene Information Gene Symbol RPD 1 Chromosome Locus At4g33495   Alleles in Database 1 Identity Confidence Confirmed Alias Symbol   Gene Class Embryo Defective Predicted Function PORR Domain Protein Function Details Probable role in organellar RNA splicing or metabolism Gene Evidence Molecular Complementation M. Sugiyama (1 allele) Border Recovery Sugiyama / Salk (1 allele) Database Release October, 2007 Predicted Sequences Gene: 1230 nucleotides mRNA: 1230 nucleotides Protein:   409 amino acids cDNA Status FLcDNA Available: AB189464 Top BLAST Hits Arabidopsis: AT1G06440.1 (38%) Plant ESTs: Medicago truncatula (71%) Model Genomes:   None Subcellular Localization TargetP Targeted to Mitochondria SUBA

Mutant Information Allele Symbol rpd 1-3 Mutant Class Embryo Defective Source of Mutant Sugiyama / Salk Mutant Line Number SALK_123424 Ecotype Columbia Genetic Background   ABRC Stock   Mutagen Treatment T-DNA Insertion Mutant Yes   Details Flanking Sequence   Location of Mutation Exon 1 Terminal Phenotype Transition Nomarski Phenotype   Allelism Evidence Reference Allele Database Release October, 2007 Seed Color   Embryo Color   Percent Mutant Seeds   Chi - Square   Seeds Counted   Percent Top Half   Chi - Square   Average Seed Length   Average Embryo Length