Aug 17, 2018 4:34 PM
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Database Query
SeedGenes Profile: RPD 1
Gene Information
Gene Symbol
RPD 1
Chromosome Locus
At4g33495
Alleles in Database
1
Identity Confidence
Confirmed
Alias Symbol
Gene Class
Embryo Defective
Predicted Function
PORR Domain Protein
Function Details
Probable role in organellar RNA splicing or metabolism
Gene Evidence
Molecular Complementation
M. Sugiyama (1 allele)
Border Recovery
Sugiyama / Salk (1 allele)
Database Release
October, 2007
Predicted Sequences
Gene:
1230 nucleotides
mRNA:
1230 nucleotides
Protein:
409 amino acids
cDNA Status
FLcDNA Available:
AB189464
Top BLAST Hits
Arabidopsis
:
AT1G06440.1 (38%)
Plant ESTs:
Medicago truncatula (71%)
Model Genomes:
None
Subcellular Localization
TargetP
Targeted to Mitochondria
SUBA
Mutant Information
Allele Symbol
rpd 1-3
Mutant Class
Embryo Defective
Source of Mutant
Sugiyama / Salk
Mutant Line Number
SALK_123424
Ecotype
Columbia
Genetic Background
ABRC Stock
Mutagen Treatment
T-DNA
Insertion Mutant
Yes
Details
Flanking Sequence
Location of Mutation
Exon 1
Terminal Phenotype
Transition
Nomarski Phenotype
Allelism Evidence
Reference Allele
Database Release
October, 2007
Seed Color
Embryo Color
Percent Mutant Seeds
Chi - Square
Seeds Counted
Percent Top Half
Chi - Square
Average Seed Length
Average Embryo Length