Aug 17, 2018 4:34 PM
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Database Query
SeedGenes Profile: SSR 16
Gene Information
Gene Symbol
SSR 16
Chromosome Locus
At4g34620
Alleles in Database
1
Identity Confidence
Confirmed
Alias Symbol
Gene Class
Embryo Defective
Predicted Function
Mitochondrial Ribosomal Protein S16
Function Details
Translation in mitochondria and chloroplasts
Gene Evidence
Phenotypic Reversion
N. Fedoroff (1 allele)
Double Border Recovery
N. Fedoroff (1 allele)
Database Release
March, 2002
Predicted Sequences
Gene:
1317 nucleotides
mRNA:
650 nucleotides
Protein:
113 amino acids
cDNA Status
FLcDNA Available:
AF412081
Top BLAST Hits
Arabidopsis
:
Only self hit
Plant ESTs:
Brassica napus (91%)
Model Genomes:
None
Subcellular Localization
TargetP
Targeted to Mitochondria
SUBA
mRNA Expression Data
NASCArray Spot History for
253201_at
Mutant Information
Allele Symbol
ssr 16
Mutant Class
Embryo Defective
Source of Mutant
N. Fedoroff
Mutant Line Number
Ecotype
Nossen
Genetic Background
ABRC Stock
Mutagen Treatment
Transposon
Insertion Mutant
Yes
Details
Flanking Sequence
Location of Mutation
Exon 1
Terminal Phenotype
Transition
Details
Nomarski Phenotype
Images
Allelism Evidence
Reference Allele
Database Release
March, 2002
Seed Color
White
Embryo Color
White
Percent Mutant Seeds
25.7 %
Chi - Square
0.3
Seeds Counted
1195
Percent Top Half
53.7 %
Chi - Square
1.7
Average Seed Length
450 ± 40 µm
Average Embryo Length
80 ± 30 µm