OSU Syngenta vbi

SeedGenes Profile: TTN 6

Gene Information
Gene Symbol TTN 6
Chromosome Locus At3g20630   tair
Alleles in Database 2   See List OR Show All
Identity Confidence Confirmed
Alias Symbol  
Gene Class Embryo Defective
Predicted Function UBP14 Deubiquitinating Enzyme
Function Details Isopeptidase T class deubiquitinating enzyme required for ubiquitin processing and recycling
Gene Evidence
Double Border Recovery
Meinke / Syngenta (2 alleles)
Database Release March, 2002
Predicted Sequences
Gene:5630 nucleotides
mRNA: 2684 nucleotides
Protein:  797 amino acids
cDNA Status FLcDNA Available: AY140096
Top BLAST Hits
Arabidopsis: Only self hit
Plant ESTs: Rice (Oryza sativa) (69%)
Model Genomes:  Homo sapiens (48%)
Subcellular Localization TargetP Not Targeted to Cell Compartment
mRNA Expression Data NASCArray Spot History for 257085_at
Mutant Information
Allele Symbol ttn 6-4
Mutant Class Embryo Defective
Source of Mutant Meinke / Syngenta
Mutant Line Number 84663
Ecotype Columbia
Genetic Background  
ABRC Stock CS16079
Mutagen Treatment T-DNA
Insertion Mutant Yes   Details
Flanking Sequence Details  (Help)
Location of Mutation Intron 5 to Intron 7
Terminal Phenotype Globular  Details
Nomarski Phenotype   Images
Allelism Evidence Complementation Test; Sequence Identity
Database Release March, 2002
Seed Color White
Embryo Color White
Percent Mutant Seeds 27.2 %
Chi - Square 2.9
Seeds Counted 1160
Percent Top Half 52.4 %
Chi - Square 0.8
Average Seed Length 480 ± 40 µm
Average Embryo Length 20 ± 20 µm